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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109468951, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARSLGSGV GRLLRGLHGH SGQSGWLLSL SRWTTTRFLG SVPAAAQLGS YPALSAQAAQ  60
   61 EPAAFWGPLA RDTLVWDTPY HTVWDCDFRT GKIGWFLGGQ LNVSVNCLDQ HVQKSPDTIA 120
  121 LIWERDEPGT EVRITYRELL ETTCRLANTL KRHGVHRGDR VAIYMPVSPL AVAAMLACAR 180
  181 IGAIHTVVFA GFSAESLAGR INDAKCKVVI TFNQGLRGGR VVELKKIVDE AVKNCPTVQH 240
  241 VLVAHRTDTK VPMGNLDIPL EQEMANEAPV CTPESMNSED MLFMLYTSGS TGTPKGLVHT 300
  301 QAGYLLYAAM THKLVFDYHP GDVFGCVADI GWITGHSYVV YGPLCNGATT VLFESTPVYP 360
  361 DAGRYWETVQ RLKINQFYGA PTAVRLLLKF GDAWVKKYDR SSLRTLGSVG EPINHEAWEW 420
  421 LHKVVGDGRC TLVDTWWQTE TGGICIAPRP SEDGAEILPG MAMRPFFGIV PALMDEKGNV 480
  481 VEGGDVSGAL CISQAWPGMA RTIYGDHQRF VDAYFRTYPG YYFTGDGAHR TEGGYYQITG 540
  541 RMDDVINISG HRLGTAEIED AMADHPAVPE TAVIGYPHDI KGEAAFAFIV LKDDVRDANV 600
  601 VVNELKLAVA TKIAKYAVPD QILVVKRLPK TRSGKVMRRL LRKIITSRGQ DLGDTTTLED 660
  661 PSVITEIMSA FREYEEQRAA TN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle