YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PR3D4_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLTLTLSGS SMQLLLLVSN LLLWENMASK PTVLVSTEDL YHRLVEQSHN TFIKAADVYR  60
   61 EFDINFAKRS WMKDRILPLC HTASIHVPEN REEVHEIKTE DLLRSIINIS VSWKEPLKHF 120
  121 VSAVTDLPGA SASMRKKAVD MKDKNLIILE GLQKIFNRTQ TKVEENENFD YPAWSGLKDL 180
  181 QSSDEDTHLF AIYNLCRCFK SDIHKIDTYL KVLRCRVVFK NEC

Type	Start	End	Confidence
Signal Peptide	1	28	0.85
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	223	0.99