YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149020443, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPCTASPCG GSAASAQPQR GLETARVDSK RTEGQDLNFS KNLRAVVSVL GSWLRDHPQD  60
   61 FRDPPDHQNL GDVRIFLGWA APGGAEVREA EKLLEDFLKE AKEEQTEGEQ RLAWAGPPWA 120
  121 AQSPRSEFAE DYSEEEGLRS EGPELLDFSV DEVAEQLTLM DVELFLRVRS CECLGSMWSQ 180
  181 RDRPGAAGIS PTVRATVAQF NAVTGCVLGS VLAAPGLAAS QRAQRIEKWI RIAQRCRELR 240
  241 NFSSLRAILS ALQSNPIYRL KRSWGAVSRE PLSVFRKLSQ IFSDEDNHLS SRAILSQEET 300
  301 TEGPQGDDCS PGSLPSKLPP GPVPYLGTFL TDLVMLDTAL PDMLKV

Type	Start	End	Confidence
Signal Peptide	1	16	0.86
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	346	0.91