YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68534822, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEGDNRSSN LLAVETASLE EQLQGWGEVM LMADKVLRWE RAWFPPAIMG VVSLLFLIIY  60
   61 YLDPSVLSGV SCFVMFLCLA DYLVPILAPR IFGSNKWTTE QQQRFHEICS NLVKTRRRAV 120
  121 GWWKRLFTLK EEKPKMYFMT MIISLAAVAW VGQQVHNLLL TYLIVTFVLL LPGLNQHGII 180
  181 LKYIGMAKRE INKLLKQKEK KNE

Type	Start	End	Confidence
Cytoplasmic	1	41	0.98
Transmembrane Helix	42	61	0.96
Non-Cytoplasmic	62	66	0.79
Transmembrane Helix	67	88	0.89
Cytoplasmic	89	133	0.96
Transmembrane Helix	134	153	0.91
Non-Cytoplasmic	154	158	0.81
Transmembrane Helix	159	181	0.89
Cytoplasmic	182	203	0.93