YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109507457, gi...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHRCLLLWG RGGCRRGLPP LLVPSGCLGP GRRPCLRTLY QYATVQTANS RSSLLRDVIA  60
   61 AYQRFCSRPP KGFEKYFPNG KNGKKASESK EAVGEKKESQ LSGPQSSGGA SGGGGKRRGK 120
  121 KEDSHWWSRF QKGDFPWDDK DFRMYFLWTA LFWSGVMIYF LFKSSGREIT WKDFVNNYLS 180
  181 KGVVDRLEVV NKRFVRVTFT PGKTPVDGQY VWFNIGSVDT FERNLETLQQ ELGIEGENRV 240
  241 PVVYIAESDG SFLLSMLPTV LIIAFLLYTI RRGPAGIGRT GRGMGGLFSV GETTAKVLKD 300
  301 EIDVKFKDVA GCEEAKLEIM EFVNFLKNPK QYQDLGAKIP KGAILTGPPG TGKTLLAKAT 360
  361 AGEANVPFIT VSGSEFLEMF VGVGPARVRD LFALARKNAP CILFIDEIDA VGRKRGRGNF 420
  421 GGQSEQENTL NQLLVEMDGF NTTTNVVILA GTNRPDILDP ALLRPGRFDR QIFIGPPDIK 480
  481 GRASIFKVHL RPLKLDSALE KDKLARKLAS LTPGFSGADV ANVCNEAALI AARHLSDAIN 540
  541 EKHFEQAIER VIGGLEKKTQ VLQPEEKKTV AYHEAGHAVA GWYLEHADPL LKVSIIPRGK 600
  601 GLGYAQYLPK EQYLYTKEQL LDRMCMTLGG RVSEEIFFGR ITTGAQDDLR KVTQSAYAQI 660
  661 VQFGMNEKVG QISFDLPRQG DMVLEKPYSE ATARMIDDEV RILISEAYKR TVALLTEKKA 720
  721 DVEKVALLLL EKEVLDKNDM VELLGPRPFT EKSTYEEFVE GTGSLDEDTS LPEGLQDWNK 780
  781 EREKEKKEKK EKEEPVNEKV VS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle