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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109507338, gi...
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADAPKAVLG PLVGAVDQGT SSTRFLVFNP QTAELLCHHQ VEIAQEFPRE GWVEQDPKVI  60
   61 LQSVYECIEK TCEKLGQQSI DISNIKAIGV TNQRETTIVW DKFTGEPLYN AVVWLDLRTQ 120
  121 STVENLNKSI SASNNFIKIK TGLPISTYFS AVKLHWLIEN VKNVQKAIED GRAFFGTVDS 180
  181 WLIWCMTGGI NGGVHCTDVS NASRTMLFNI HSLQWDEELC EFFGIPMTIL PRIRSSSEIY 240
  241 GLMKSGVLEG VPISGCLGDQ SAALVGQLCL QDGQAKSTYG TGCFLLCNTG QKCVNSDHGL 300
  301 LTTVAYKMGR EEPVYYALEG SVAIAGAVVS WLKNNLQIIK SSSDIEKLAE KAGTSYGCYF 360
  361 VPAFSGLYAP YWDPSARGII CGLTQFTNKF HIAFAALEAV CFQTREILDA MNSDCGIPLT 420
  421 HLQVDGGMTA NKILMQLQAD ILCIPVMKPF MPETTALGAA MAAGAAEGIR VWSLDPKDLT 480
  481 GVQMEKFEPQ INVEESEGRY STWKRAVMKS MGWVLTQSPD GHDPSIFRSL TLGFYIVSSM 540
  541 VLLIGARYI

YRC Informatics Platform - Version 3.0
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