YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AQP7_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSVLENIQ SVLQKTWVRE FLAEFLSTYV LMVFGLGSVA HMVLGERLGS YLGVNLGFGF  60
   61 GVTMGIHVAG GISGAHMNAA VTFTNCALGR MAWKKFPIYV LGQFLGSFLA AATTYLIFYG 120
  121 AINHYAGGEL LVTGPKSTAN IFATYLPEHM TLWRGFVDEV FVTGMLQLCI FAITDKLNSP 180
  181 ALQGTEPLMI GILVCVLGVS LGMNTGYAIN PSRDLPPRFF TFIAGWGKKV FSAGNNWWWV 240
  241 PVVAPLLGAY LGGIVYLGLI HAGIPPQGS

Type	Start	End	Confidence
Cytoplasmic	1	20	0.97
Transmembrane Helix	21	44	0.89
Non-Cytoplasmic	45	62	0.73
Transmembrane Helix	63	84	0.79
Cytoplasmic	85	97	0.81
Transmembrane Helix	98	119	0.93
Non-Cytoplasmic	120	154	0.88
Transmembrane Helix	155	174	0.76
Cytoplasmic	175	187	0.66
Transmembrane Helix	188	209	0.91
Non-Cytoplasmic	210	239	0.74
Transmembrane Helix	240	264	0.84
Cytoplasmic	265	269	0.76