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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ZP4_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARQALRSTL WLLPSILLCF PFCLPLSGQH VTELPGVLHC GLQSFQFAVN LSLEAESPVL  60
   61 TTWDSQGLPH RLKNDSDCGT WVMDSPDGFL VLEASYSGCY VTLEGSHYIM TVGVQEADVA 120
  121 GHVAGTRQRL LTCPLALQGK APDTPNAKVC SPVPVKERLP CASSTISRGD CEELGCCYSS 180
  181 EEEGADSCYY GNTVTSHCTK EGHFSIAVSR DVTSPPLRLD SLRLGFRNIT TGCDPVMKTS 240
  241 TFVLFQFPLT SCGTTQRITG DQAMYENELV AIRDVQAWGR SSITRDSNFR LRVSCTYSIH 300
  301 SIMSPVNMQV WTLPPPLPKT QPGPLSLELQ IAQDKNYSSY YGTDAYPLVK FLQDPIYVEV 360
  361 SILHRTDPSL SLLLEQCWAT PGSNPFHQPQ WPILVKGCPY AGDNYQTKRI PVQKASDVFP 420
  421 SHHQRFSIST FSFMSAGREK QVLGGQVYLH CSASVCQPAG MPSCTVICPA SRRRRKSELY 480
  481 FDNSTSISSK GPVILLQATK DPAVMLHKHS GTHADSPTLW VMGLSASMVI TGVLVVSYLA 540
  541 TRKQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle