YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PENK_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQFLRLCIW LLALGSCLLA TVQADCSQDC AKCSYRLVRP GDINFLACTL ECEGQLPSFK  60
   61 IWETCKDLLQ VSKPEFPWDN IDMYKDSSKQ DESHLLAKKY GGFMKRYGGF MKKMDELYPV 120
  121 EPEEEANGGE ILAKRYGGFM KKDADEGDTL ANSSDLLKEL LGTGDNRAKD SHQQESTNND 180
  181 EDSTSKRYGG FMRGLKRSPQ LEDEAKELQK RYGGFMRRVG RPEWWMDYQK RYGGFLKRFA 240
  241 ESLPSDEEGE SYSKEVPEME KRYGGFMRF

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	269	0.99