YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TNFB_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPLGRLHLL RVLSTPPVFL LGLLLALPLG AQGLSGVRFS ASRTAHQPPQ KHLTHGLLKP  60
   61 AAHLVGYPSK QNSLLWRANT DRAFLRHGFS LNNNSLLIPT SGLYFVYSQV VFSGESCSPR 120
  121 AIPTPIYLAH EVQLFSSQYP FHVPLLSAQK SVYPGLQGPW VRSMYQGAVF LLSKGDQLST 180
  181 HTDGISHLHF SPSTVFFGAF AL

Type	Start	End	Confidence
Signal Peptide	1	33	0.98
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	202	0.99