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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PEPC_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWMVVALLC LPLLEASLLR VPLRKMKSIR ETMKEQGVLK DFLKTHKYDP GQKYHFGNFG  60
   61 DYSVLYEPMA YMDASYFGEI SIGTPPQNFL VLFDTGSSNL WVSSVYCQSE ACTTHARFNP 120
  121 SKSSTYYTEG QTFSLQYGTG SLTGFFGYDT LTVQSIQVPN QEFGLSENEP GTNFVYAQFD 180
  181 GIMGLAYPGL SSGGATTALQ GMLGEGALSQ PLFGVYLGSQ QGSNGGQIVF GGVDKNLYTG 240
  241 EITWVPVTQE LYWQITIDDF LIGDQASGWC SSQGCQGIVD TGTSLLVMPA QYLSELLQTI 300
  301 GAQEGEYGEY FVSCDSVSSL PTLSFVLNGV QFPLSPSSYI IQEDNFCMVG LESISLTSES 360
  361 GQPLWILGDV FLRSYYAIFD MGNNKVGLAT SV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle