YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADRB2_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPHGNDSDF LLAPNGSRAP GHDITQERDE AWVVGMAILM SVIVLAIVFG NVLVITAIAK  60
   61 FERLQTVTNY FITSLACADL VMGLAVVPFG ASHILMKMWN FGNFWCEFWT SIDVLCVTAS 120
  121 IETLCVIAVD RYVAITSPFK YQSLLTKNKA RVVILMVWIV SGLTSFLPIQ MHWYRATHKQ 180
  181 AIDCYAKETC CDFFTNQAYA IASSIVSFYV PLVVMVFVYS RVFQVAKRQL QKIDKSEGRF 240
  241 HAQNLSQVEQ DGRSGHGLRS SSKFCLKEHK ALKTLGIIMG TFTLCWLPFF IVNIVHVIRA 300
  301 NLIPKEVYIL LNWLGYVNSA FNPLIYCRSP DFRIAFQELL CLRRSSSKTY GNGYSSNSNG 360
  361 RTDYTGEQSA YQLGQEKENE LLCEEAPGME GFVNCQGTVP SLSIDSQGRN CNTNDSPL

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.91
Transmembrane Helix	34	58	0.87
Cytoplasmic	59	69	0.78
Transmembrane Helix	70	91	0.92
Non-Cytoplasmic	92	108	0.82
Transmembrane Helix	109	133	0.81
Cytoplasmic	134	149	0.95
Transmembrane Helix	150	171	0.89
Non-Cytoplasmic	172	200	0.93
Transmembrane Helix	201	223	0.89
Cytoplasmic	224	273	0.97
Transmembrane Helix	274	297	0.84
Non-Cytoplasmic	298	308	0.84
Transmembrane Helix	309	327	0.55
Cytoplasmic	328	418	0.59