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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11066038
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIYSPDMSE VAGGRSSSPS TQLSAAPSLD GLPAAEEHIP DTHTEDERSP GLLGLAVPCC  60
   61 VCLEAERLRG CLNSEKICIV PILACLVSLC LCIAGLKWVF VDKIFEYDSP THLDPGGLGQ 120
  121 DPVISLDPTA APAILVSSEA YTSPVSKAQS EAGAHVTVQG DHAAVASEPS AVPTRKNRLS 180
  181 AFPPFHSTAP PFPSPARTPE VRTPKSGTQP QTTETNLQTA PKLSTSTSTT GTSHLIKCAE 240
  241 KEKTFCVNGG ECFTVKDLSN PSRYLCKCPN EFTGDRCQNY VMASFYKHLG IEFMEAEELY 300
  301 QKRVLTITGI CIALLVVGIM CVVAYCKTKK QRQKLHDRLR QSLRSERSNL VNIANGPHHP 360
  361 NPPPENVQLV NQYVSKNVIS SEHIVEREVE TSFSTSHYTS TAHHSTTVTQ TPSHSWSNGH 420
  421 TESVISESNS VIMMSSVENS RHSSPAGGPR GRLHGLGGPR DNSFLRHARE TPDSYRDSPH 480
  481 SERYVSAMTT PARMSPVDFH TPSSPKSPPS EMSPPVSSMT VSMPSVAVSP FVEEERPLLL 540
  541 VTPPRLREKK YDHHPQQLNS FHHNPAHQST SLPPSPLRIV EDEEYETTQE YESVQEPVKK 600
  601 VTNSRRAKRT KPNGHIANRL EMDSNTSSVS SNSESETEDE RVGEDTPFLG IQNPLAASLE 660
  661 VAPAFRLAES RTNPAGRFST QEELQARLSS VIANQDPIAV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle