YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11066042
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STAPPFPSPA RTPEVRTPKS GTQPQTTETN LQTAPKLSTS TSTTGTSHLI KCAEKEKTFC  60
   61 VNGGECFTVK DLSNPSRYLC KCQPGFTGAR CTENVPMKVQ TQEKAEELYQ KRVLTITGIC 120
  121 IALLVVGIMC VVAYCKTKKQ RQKLHDRLRQ SLRSERSNLV NIANGPHHPN PPPENVQLVN 180
  181 QYVSKNVISS EHIVEREVET SFSTSHYTST AHHSTTVTQT PSHSWSNGHT ESVISESNSV 240
  241 IMMSSVENSR HSSPAGGPRG RLHGLGGPRD NSFLRHARET PDSYRDSPHS ERHNLIAE

Type	Start	End	Confidence
Cytoplasmic	1	112	0.59
Transmembrane Helix	113	135	0.88
Non-Cytoplasmic	136	298	0.65