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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11066050
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSVGSVQELA RRAAVVIEGK VHPPRRQQGA LDRKAAGEAG AGARDQPVQD SPPSQDPLPA  60
   61 VNWTLPTGGP EPSTDQPGDP APYLVKVHQV WAVKAGGLKK DSLLTVRLDT WGHPAFPSCG 120
  121 RLKEDSRYIF FMEPDANSSG RAPPAFRASF PPLETGRNLK KEVSRVLCKR CALPPRLKEM 180
  181 KSQESAAGSK LVLRCETSSE YSSLRFKWFK NGNELNRKNK PENIKIQKKP GKSELRINKA 240
  241 SLADSGEYMC KVISKLGNDS ASANITIVES NEFITGMPAS TETAYVSSES PIRISVSTEG 300
  301 ANTSSSTSTS TTGTSHLIKC AEKEKTFCVN GGECFTVKDL SNPSRYLCKC PNEFTGDRCQ 360
  361 NYVMASFYKH LGIEFMEAEE LYQKRVLTIT GICIALLVVG IMCVVAYCKT KKQRQKLHDR 420
  421 LRQSLRSERS NLVNIANGPH HPNPPPENVQ LVNQYVSKNV ISSEHIVERE VETSFSTSHY 480
  481 TSTAHHSTTV TQTPSHSWSN GHTESVISES NSVIMMSSVE NSRHSSPAGG PRGRLHGLGG 540
  541 PRDNSFLRHA RETPDSYRDS PHSERYVSAM TTPARMSPVD FHTPSSPKSP PSEMSPPVSS 600
  601 MTVSMPSVAV SPFVEEERPL LLVTPPRLRE KKYDHHPQQL NSFHHNPAHQ STSLPPSPLR 660
  661 IVEDEEYETT QEYESVQEPV KKVTNSRRAK RTKPNGHIAN RLEMDSNTSS VSSNSESETE 720
  721 DERVGEDTPF LGIQNPLAAS LEVAPAFRLA ESRTNPAGRF STQEELQARL SSVIANQDPI 780
  781 AV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle