YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TRYA_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKICIFFTLL GTVAAFPTED NDDRIVGGYT CQEHSVPYQV SLNAGSHICG GSLITDQWVL  60
   61 SAAHCYHPQL QVRLGEHNIY EIEGAEQFID AAKMILHPDY DKWTVDNDIM LIKLKSPATL 120
  121 NSKVSTIPLP QYCPTAGTEC LVSGWGVLKF GFESPSVLQC LDAPVLSDSV CHKAYPRQIT 180
  181 NNMFCLGFLE GGKDSCQYDS GGPVVCNGEV QGIVSWGDGC ALEGKPGVYT KVCNYLNWIH 240
  241 QTIAEN

Type	Start	End	Confidence
Signal Peptide	1	15	0.97
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	246	0.99