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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IPI:IPI00285619....
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRVAVAAV FATGRKLRCE AGRDVTAVGR IEARGLCEES AKPFPTLTMP GRNKAKSTCS  60
   61 CPDLQPNGQD LGESGRVARL GADESEEEGR SLSNVGDPEI IKSPSDPKQY RYIKLQNGLQ 120
  121 ALLISDLSNV EGKTGNATDE EEEEEEEEEE GEEEEEEEED DDDDDDEDSG AEIQDDDEEG 180
  181 FDDEEEFDDD EHDDDDLDNE ENELEELEER VEARKKTTEK QQSQNLFLLW SKLTDRLWFK 240
  241 SSYSKMSSTL LVETRNLYGV VGAESRSAPV EHLAGWQVEE QQGETDTVLS AAALCVGVGS 300
  301 FADPDDLPGL AHFLEHMVFM GSLKYPDENG FDAFLKKHGG SDNASTDCER TVFQFDVQRK 360
  361 YFKEALDRWA QFFIHPLMIR DAIDREVEAV DSEYQLARPS DANRKEMLFG SLARPGHPMG 420
  421 KFFWGNAETL KHEPKKNNID THARLREFWM RYYSAHYMTL VVQSKETLDT LEKWVTEIFS 480
  481 QIPNNGLPKP NFSHLTDPFD TPAFNKLYRV VPIRKIHALT ITWALPPQQQ HYRVKPLHYI 540
  541 SWLVGHEGKG SILSYLRKKC WALALFGGNG ETGFEQNSTY SVFSISITLT DEGYEHFYEV 600
  601 AHTVFQYLKM LQKLGPEKRV FEEIQKIEDN EFHYQEQTDP VEYVENMCEN MQLYPRQDFL 660
  661 TGDQLLFEYK PEVIAEALNQ LVPQKANLVL LSGANEGRCD LKEKWFGTQY SIEDIENSWT 720
  721 ELWKSNFDLN SDLHLPAENK YIATDFTLKA FDCPETEYPA KIVNTPQGCL WYKKDNKFKI 780
  781 PKAYIRFHLI SPLIQKSAAN VVLFDIFVNI LTHNLAEPAY EADVAQLEYK LVAGEHGLII 840
  841 RVKGFNHKLP LLFQLIIDYL TEFSSTPAVF TMITEQLKKT YFNILIKPET LAKDVRLLIL 900
  901 EYSRWSMIDK YRALMDGLSL ESLLNFVKDF KSQLFVEGLV QGNVTSTESM DFLRYVVDKL 960
  961 NFVPLEREMP VQFQVVELPS GHHLCKVRAL NKGDANSEVT VYYQSGTRSL REYTLMELLV1020
 1021 MHMEEPCFDF LRTKQTLGYH VYPTCRNTSG ILGFSVTVGT QATKYNSETV DKKIEEFLSS1080
 1081 FEEKIENLTE DAFNTQVTAL IKLKECEDTH LGEEVDRNWN EVVTQQYLFD RLAHEIEALK1140
 1141 SFSKSDLVSW FKAHRGPGSK MLSVHVVGYG KYELEEDGAP VCEDPNSREG MQLIYLPPSP1200
 1201 LLAESTTPIT DIRAFTATLS LFPYHKIVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle