YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AQP2_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWELRSIAFS RAVLAEFLAT LLFVFFGLGS ALQWASSPPS VLQIAVAFGL GIGILVQALG  60
   61 HVSGAHINPA VTVACLVGCH VSFLRAAFYV AAQLLGAVAG AAILHEITPV EIRGDLAVNA 120
  121 LHNNATAGQA VTVELFLTMQ LVLCIFASTD ERRGDNLGSP ALSIGFSVTL GHLLGIYFTG 180
  181 CSMNPARSLA PAVVTGKFDD HWVFWIGPLV GAIIGSLLYN YLLFPSAKSL QERLAVLKGL 240
  241 EPDTDWEERE VRRRQSVELH SPQSLPRGSK A

Type	Start	End	Confidence
Cytoplasmic	1	11	0.86
Transmembrane Helix	12	32	0.91
Non-Cytoplasmic	33	40	0.74
Transmembrane Helix	41	62	0.87
Cytoplasmic	63	80	0.58
Transmembrane Helix	81	104	0.69
Non-Cytoplasmic	105	125	0.91
Transmembrane Helix	126	147	0.89
Cytoplasmic	148	156	0.85
Transmembrane Helix	157	180	0.85
Non-Cytoplasmic	181	201	0.91
Transmembrane Helix	202	223	0.95
Cytoplasmic	224	271	0.97