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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: S27A5_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVWKKLTFL LLSLLLLVGL GQPLWPAATA LALRWFLGDP TCFVLLGLAF LGRPWISSWI  60
   61 PHWLSLAAAA LTLSLLPPRP PPELRWLHKD VAFAFKLLFY GLNLRRRLNR HPPELFVDAL 120
  121 EQQAQARPDQ VALVCTGSEG CSITNRELNA KACQAAWALK AKLKEATIQE DKGATAILVL 180
  181 PSKSISALSV FLGLAKLGCP VAWINPHSRG MPLLHSVQSS GASVLIVDPD LQENLEEVLP 240
  241 KLLAENIRCF YLGHSSPTPG VEALGAALDA APSDPVPAKL RANIKWKSPA IFIYTSGTTG 300
  301 LPKPAILSHE RVIQMSNVLS FCGRTADDVV YNVLPLYHSM GLVLGVLGCL QLGATCVLAP 360
  361 KFSASRYWAE CRQYSVTVVL YVGEVLRYLC NVPGQPEDKK HTVRFALGNG LRADVWENFQ 420
  421 QRFGPIQIWE LYGSTEGNVG LMNYVGHCGA VGKTSCFIRM LTPLELVQFD IETAEPVRDK 480
  481 QGFCIPVETG KPGLLLTKIR KNQPFLGYRG SQDETKRKLV ANVRQVGDLY YNTGDVLALD 540
  541 QEGFFYFRDR LGDTFRWKGE NVSTREVEGV LSILDFLEEV NVYGVTVPGC EGKVGMAAVK 600
  601 LAPGKTFDGQ KLYQHVRSWL PAYATPHFIR IQDSLEITNT YKLVKSQLAR EGFDVGVIAD 660
  661 PLYILDNKAE TFRSLMPDVY QAVCEGTWKL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle