YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220710, gi\|51...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKFCTGGE AEPSPLGLLL SCGGSAAPTP GVGQQRDAAG ELESKQLGGR SQPLALPPPP  60
   61 PPPLPLPPPP SPPLADEQPE PRTRRRAYLW CKEFLPGAWR GLREDQFHIS VIRGGLSNML 120
  121 FQCSLPDSIA SVGDEPRKVL LRLYGAILKM GAEAMVLESV MFAILAERSL GPKLYGIFPQ 180
  181 GRLEQFIPSR RLDTEELCLP DISAEIAEKM ATFHGMKMPF NKEPKWLFGT MEKYLNQVLR 240
  241 LKFSREARVQ QLHKFLSYNL PLELENLRSL LQYTRSPVVF CHNDCQEGNI LLLEGQENSE 300
  301 KQKLMLIDFE YSSYNYRGFD IGNHFCEWMY DYTYEKYPFF RANIQKYPTR KQQLHFISSY 360
  361 LTTFQNDFES LSSEEQSATK EDMLLEVNRF ALASHFLWGL WSIVQAKISS IEFGYMEYAQ 420
  421 ARFDAYFDQK RKLGV

Type	Start	End	Confidence
Signal Peptide	1	33	0.75
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	435	0.99