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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACET_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQGWATPGL PRFLFLLLCC GHLLPVLSQV AADHVTANQG ITNQATTRSQ TTHQSTISQT  60
   61 IQTSNGTPGR GQGHEGARSQ GPAGGNSNKT TPCGKEGEAC LFSSSPPTDL ETDEAKANRF 120
  121 VEEYDRTAKV LWNEYAEANW HYNTNITIEG SKILLQKNKE VSNHTLKYGT WAKTFDVSNF 180
  181 QNSTIKRIIK KVQNVDRAVL PPNELEEYNQ ILLDMETTYS VANVCYTNGT CLSLEPDLTN 240
  241 IMATSRKYEE LLWVWKSWRD KVGRAILPFF PKYVDFSNKI AKLNGYSDAG DSWRSSYESD 300
  301 DLEQDLEKLY QELQPLYLNL HAYVRRSLHR HYGSEYINLD GPIPAHLLGN MWAQTWSNIY 360
  361 DLVAPFPSAP SIDATEAMIK QGWTPRRIFK EADNFFTSLG LLPVPPEFWN KSMLEKPTDG 420
  421 REVVCHASAW DFYNGKDFRI KQCTSVNMEE LVIAHHEMGH IQYFMQYKDL PVTFREGANP 480
  481 GFHEAIGDVL ALSVSTPKHL HSLNLLSSEG SGYEHDINFL MKMALDKIAF IPFSYLIDQW 540
  541 RWRVFDGSIT KENYNQEWWS LRLKYQGLCP PVPRSQGDFD PGSKFHVPAN VPYIRYFISF 600
  601 IIQFQFHEAL CRAAGHTGPL YKCDIYQSKE AGKLLADAMK LGYSKQWPEA MKIITGQPNM 660
  661 SASAIMNYFK PLTEWLVTEN RRHGETLGWP EYTWTPNTAR AEGSLPESSR VNFLGMYLEP 720
  721 QQARVGQWVL LFLGVALLVA TVGLAHRLYN IHNHHSLRRP HRGPQFGSEV ELRHS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle