YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MB12A_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPGTDSTPL AALVWSSASA PPPPGFSAIT CTVEGATASF GRGFAQKAGY FLCLSTLGIP  60
   61 ENPQDNVVVD MQIVMDKGPL PPGFSTVNDP QDARTSVSKK KRMCVKLMPL GTADVVVSDV 120
  121 KLSGKTKTVP GYLRVGDIGG FAIWCKKSKA PKLVPKPGTL SQDMRGLSLD QPKEPSKGSH 180
  181 PERTLSRLGS RASTLRRNDS IYEASSLYGI SAMDGVPFTL HPRFEGKSCG PLNLSAFGDL 240
  241 TIKSLADIEK EYNYGFVVEK TAAARLPPSV S

Type	Start	End	Confidence
Signal Peptide	1	27	0.90
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	271	0.99