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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9931450, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHFQAILAQ VQTLLSSQQP RQVRALLDGL LEEELLSREY HCALLHEPDG EALARKISLT  60
   61 LLEKGDLDLA FVSWVCNRLQ VPEVERGPNC RDHGGHTLCA TMELGSPEGS YLELLNSDAD 120
  121 PLHLYHLYDQ MDLAGEEEIE LNSETDMDTI NCDQFSKLLQ DMEMDEETRE AYANIAELDQ 180
  181 YVFQDTQLEG LSKDLFIQHI GPEEGFGENV EGPAESGEKP QKRRFPEEHA MDSKHRKLVP 240
  241 PSRTSLNYLD LPAGHIQIFT TLPQGLWQIS GVGTGLSSVL VYHGEMPQVN QLLSSSSPTV 300
  301 PSLPESPDRP GSTSPFAPST ADLPGMPEPA LTSRVNETED TTPPSPCQED PEPSIKLPKW 360
  361 PESVERFQHS LQDKYQALPG SPSGPLVAME LVRARLERGS NKSQERELAT PDWTERQLAH 420
  421 GGLAEVLRVV GDSRRSRETQ VVAVLGKAGQ GKSHWARTVS HIWAQGQLPQ YDFVFYVPCQ 480
  481 CLDRPGDTYH LRDLLCPPNL QPLAMNDEVI DHIVRQPDRV LLILDAFEEL EAQDSLLHGP 540
  541 CGPLSPEPCS LRGLLAGLFQ RKLLRGCTLL LTARPRGRLA QSLSKADAIF EVPSFSTKQA 600
  601 QIYMRHYFEN SGTAGSHDKA LGLLEGQPFL LTHSHSPVLC SAVCQLSKAL LDQGAGAQLP 660
  661 CTLTGLYVGL LGPAAQNSPP GALVELAKLA WELGRRHQST LQETQFPSVE VKTWAVAQGL 720
  721 MQQTTEAQLA FSSFLLQCFL GAVWLAQCNE MKDKELPQYL ALTPRKKRPY DNWLEGVPRF 780
  781 LAGLVFQPRA HCLGALVEPA MAAVADRKRK VLTRYLKRLK LGTLRAGRLL ELLHCAHETQ 840
  841 EPGIWKHVSH QLPGHLSFLG TRLTAPDVYV LGRALETASQ DFSLDLRQTG IEPSRLGDLV 900
  901 GLSCVTSFRA SLSDTMALWE SLQHQGETQL LQAAEEKFTI EPFKAKSPKD VEDLDSLVQT 960
  961 QRLRNPSADA AKDLPAIRDL KKLEFALGPV LGPQAFPTLA KILPAFSSLQ HLDLDSLSEN1020
 1021 KIGDKGVSKL SATFPQLKAL ETLNLSQNSI TDVGACKLAE ALPALAKSLL RLSLYNNCIC1080
 1081 DEGAKSLARV LPDMVSLRVM DVQFNKFTAV GAQQLTSSLQ KCPQVETLAM WTPTIPFGVQ1140
 1141 EHLQQLDARI SLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle