YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157820445, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVILVLLTS FFSILYLATP SIRKFFAGGV CTTKVQIPGK VVVITGANTG IGKETARELA  60
   61 RRGARVYIAC RDVLKGESAA SEIRADTKNS QVLVRKLDLS DTKSIRTFAE GFLAEEKKLH 120
  121 ILINNAGVMM CPYSKTVDGF ETHFGVNHLG HFLLTYLLLG RLKESAPARV INLSSVAHLG 180
  181 GKIRFHDLQS KKRYCSGFAY SHSKLANVLF TRELAKRLQG TGVTAYVVHP GCVLSEITRH 240
  241 SFLMCLLWRL FSPFFKSPWQ GAQTSLHCAL EEGLEPLSGK YFSDCKRTWV SPRARNKKTA 300
  301 ERLWNVSCEL LGIQWE

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	316	0.99