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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CBPN_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDLPSAFLP LLLLSKFVTP VTFRHHRYDD LVRTLYKVHN QCPDITRLYN IGRSVKGRYL  60
   61 YVLEFSDYPG THEPLEPEVK YVGNMHGNEV LGRELLLQLS EFLCEEFRNR NQRILRLIQD 120
  121 TRIHILPSMN PDGYEVAAAQ GPNTSGYLVG RNNANGVDLN RNFPDLNTYF YYNSKYGGPN 180
  181 HHLPLPDNWK SQVEPETRAV IQWIRSLNFV LSANMHGGAV VANYPYDKSL EHRFRSPHRT 240
  241 SNSPTPDDEL FQTLAKVYSY AHGWMHQGWN CGDYFPDGIT NGASWYSLSK GMQDFNYLHT 300
  301 NCFEITLELS CNKFPRQEEL QREWLGNREA LIQFLEQVHQ GIKGMVLDEN YNNLTGAVIS 360
  361 VTGINHDVTS GEHGDYFRLL LPGTYSVTAK ASGYEPKTVT VTVGPAGPTL VDFQLKRSTT 420
  421 QVHPVQKAPG RGQGSRAKQP RTSRKKDQAA KRHRGPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle