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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62651421, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGSALAFLT AALLCLHNCQ RGPALVLGAA WVFSLVLGLG QSEHNRCDSA NVVSCARCLQ  60
   61 LGPECGWCVQ EDFVSGGSRS ERCDTVSNLI SKGCPVDSIE YLSVHVVTSS ENEINTQVTP 120
  121 GDVSIQLHPG AEANFMLKIR PLKKYPVDLY YLVDVSASMH NNIEKLNSVG NDLSKKMALF 180
  181 SHDFRLGFGS YVDKTVSPYI SIHPERIHNQ CSDYNLDCMP PHGYIHVLSL TENITEFEKA 240
  241 VHRQKISGNI DTPEGGFDAM LQAAVCESHI GWRKEAKRLL LVMTDQTSHL ALDSKLAGIV 300
  301 VPNDGNCHLK NNVYVKSTTM EHPSLGQLSE KLIDNNINVI FAVQGKQFHW YKDLLPLLPG 360
  361 AIAGEIESKA ANLNNLVVEA YKKLISEVKV QLESQVHGVH FNITAICPDG ARKPGTSGCG 420
  421 NVTSNDEVLF NVTVVMKTCD IIGGKNYAII KPIGFNETTK VHIHRSCSCQ CEDHRGLKGQ 480
  481 CAEAAPDPKC PQCDDGKCHF DEDQFPSEAC KPQEDQPVCS GRGVCICGKC LCHKTKLGRV 540
  541 YGQYCEKDDF SCPYLHGDVC SGHGECEGGR CQCFNGWEGD RCQCPSASAQ HCVNSKGQVC 600
  601 SGRGTCVCGR CECTDPRSIG RLCEHCPTCH LSCSENWNCL QCLHPHNLSQ AVLDQCKASC 660
  661 AVMEQHPVAQ TSECLSGPSY LRIFFIIFIV TFLIGLLKVL IIRQVILQWN SNKIKSSSDY 720
  721 RVSASKKDKL ILQSVCTRAV TYRREKPEEI KMDISKLNAQ EAFRCNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle