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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10241815, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVNTQCSQ PSPRQLSVKD AADRDLDQVE NGLGRSHSPC EETSSTVHQG IVMETGELAG  60
   61 AAQSLFTSQG PARVSRFIIS IRAWAARHLH HEDPTPDSFL DRFHGAELKE VSSQERNAQP 120
  121 NPGGQEPPEG GKGRKKDPIV VDPSSNIYYR WLTAIALPVF YNWCLLVCRA CFDELQSEHL 180
  181 TLWLVLDYSA DALYVVDMLV RARTGFLEQG LMVRDTKRLW KHYTKTLHFK LDILSLIPTD 240
  241 LAYLKLGMNY PELRFNRLLR FSRLFEFFDR TETRTNYPNV FRIGNLVLYT LIIIHWNACI 300
  301 YFAISKFIGF GTDSWVYPNT SKPEYGRLSR KYIYSLYWST LTLTTIGETP PPVKDEEYLF 360
  361 VVIDFLVGVL IFATIVGNVG SMISNMNASR AEFQAKIDSI KQYMQFRKVT KDLETRVIRW 420
  421 FDYLWANRKT VDEKEVLKNL PDKLKAEIAI NVHLDTLKKV RIFQDCEAGL LVELVLKLRP 480
  481 AVFSPGDYIC KKGDIGREMY IIKEGKLAVV ADDGVTQFVV LSDGSYFGEI SILNIKGSKS 540
  541 GNRRTANIRS IGYSDLFCLS KDDLMETLTE YPDAKRALEE KGRQILMKDN LIDDDLVTAR 600
  601 ADARNIEEKV EYLESSLDGL QTRFARLLAE YSASQMKLKQ RLSQLESQMT RRGHGFSPDR 660
  661 ENSEDASKAD 

YRC Informatics Platform - Version 3.0
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