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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149046352, gi...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVNTQCSQ PSPRQLSVKD AADRDLDQVE NGLGRVSRFI ISIRAWAARH LHHEDPTPDS  60
   61 FLDRFHGAEL KEVSSQERNA QPNPGGQEPP EGGKGRKKDP IVVDPSSNIY YRWLTAIALP 120
  121 VFYNWCLLVC RACFDELQSE HLTLWLVLDY SADALYVVDM LVRARTGFLE QGLMVRDTKR 180
  181 LWKHYTKTLH FKLDILSLIP TDLAYLKLGM NYPELRFNRL LRFSRLFEFF DRTETRTNYP 240
  241 NVFRIGNLVL YTLIIIHWNA CIYFAISKFI GFGTDSWVYP NTSKPEYGRL SRKYIYSLYW 300
  301 STLTLTTIGE TPPPVKDEEY LFVVIDFLVG VLIFATIVGN VGSMISNMNA SRAEFQAKID 360
  361 SIKQYMQFRK VTKDLETRVI RWFDYLWANR KTVDEKEVLK NLPDKLKAEI AINVHLDTLK 420
  421 KVRIFQDCEA GLLVELVLKL RPAVFSPGDY ICKKGDIGRE MYIIKEGKLA VVADDGVTQF 480
  481 VVLSDGSYFG EISILNIKGS KSGNRRTANI RSIGYSDLFC LSKDDLMETL TEYPDAKRAL 540
  541 EEKGRQILMK DNLIDDDLVT ARADARNIEE KVEYLESSLD GLQTRFARLL AEYSASQMKL 600
  601 KQRLSQLESQ MTRRGHGFSP DRENSEDASK AD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle