YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ENTP6_RAT
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIPNHGTL RMTKVAYPLG LCVGLFIYVA YIKWHRASAA QAFFTIAGAA SGVRWTQQAF  60
   61 SSPDSATRGH EVFYGIMFDA GSTGTRIHVF QFARPPGETP TLTHETFKAL KPGLSAYADD 120
  121 VEKSAQGIQE LLNVAKQHIP YDFWKATPLV LKATAGLRLL PGEKAQKLLQ KVKEVFKASP 180
  181 FLVGDDCVSI MNGTDEGVSA WITVNFLTGS LKTPGSSSVG MLDLGGGSTQ ITFLPRVEGT 240
  241 LQASPPGHLT ALQMFNRTFK LYSYSYLGLG LMSARLAILG GVEGKPAEDD KELVSPCLSP 300
  301 RFRGKWEHAE VTYRISGQKA VGLYELCASR VSEVLRNKVH RTEEAQHVDF YAFSYYYDLA 360
  361 ASFGLIDAEK GGSLVVGDFE IAAKYVCRTL ETQPPSSPFA CMDLTYISLL LHEFGFPGDK 420
  421 VLKLARKIDN VETSWALGAI FHYIDSLKRQ KVPAL

Type	Start	End	Confidence
Cytoplasmic	1	12	0.83
Transmembrane Helix	13	32	0.89
Non-Cytoplasmic	33	455	0.76