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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IPI:IPI00190407....
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVRFSSNSR QYSSARSGGG GGGGGGGSSI RVSSTKSSLG GGYSSGGFSG GSFSRGSSSG  60
   61 GCFGGSSGGY GGFGGGSFGG GYGGGSFGGG YGGGSFGGGY GQLRWRIWRR QLRWRQLRWR 120
  121 FGGGSFGGGL GGDGGGLLSG NEKVTMQNLN DRLASYMNKV RDLEESNYEL EGKIKEWYEK 180
  181 HGNSSQREPR DYSKYYKTIE DLKGQIVNLT TDNANVLLQI DNARLAADDF RLKYENEVAL 240
  241 RQSVEADING LRRVLDELTL SKADLEMQIE SLTEELAYLK KNHEEEMKDL QNVSTGDVNV 300
  301 EMNAAPGVDL TQLLNNMRNQ YEQLAEKNRK DAEAWFNEKS KELTTEIDSN IEQMSSHKSE 360
  361 ITELRRTVQG LEIELQSQLA LKQSLEASLA ETEGRYCVQL SQIQSQISAL EEQLQQIRAE 420
  421 TECQNAEYQQ LLDIKTRLEN EIQTYRSLLE GEGGSGGGSY GGGGRGGGGH GGSYGGGSTG 480
  481 GGGGSGSYGG GSSGGGGHGG SSGGGYGGGS SSGGGHGGSS GGGYGGGSSS GGQSGSGGFK 540
  541 TSGSGGGDQS SKGPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle