YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149066200, gi...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.78
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAASSMRVF LPVLLAALLG VEQVHSLMCF SCTDQKNNIN CLWPVSCSST DNYCITLSAA  60
   61 AGFGNVNLGY TLNKGCSPTC PRENININLG VASVNSYCCQ SSFCNFSTAG LGLRASIPLL 120
  121 GLGLLLSLLA VLRLSP

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	109	0.99
Transmembrane Helix	110	132	0.71
Cytoplasmic	133	136	0.62