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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1620510, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPTVRWSAW CTGWLWIFGA ALGQCLGYGS EQQRVAFLQH PGQNHLQASY MELRPSQGCR  60
   61 PGYYRDIKSF PAGRSVPCNC NGHSNRCQDG SGVCINCQHN TAGEHCERCK RGYYGSAIHG 120
  121 SCRVCPCPHT NSFATGCAVD GGAVRCACKP GYTGAQCERC APGYFGNPQK FGGSCQPCNC 180
  181 NSNGQFGTCD PLTGDCVSQE PKDGSPAEEC DDCDSCVMTL LNDLVPMGEE LALVKSKLQG 240
  241 LSVNTGSLEQ IRHVEMQAKD LRNQLLGFRS AISSHGSQMD GLEKELSHLY QEFETLQEKA 300
  301 QVNSRKAQTL YNNIDTTIQN AKELDMKIKN ILTNVHILLK QIARPGGEGM DLPVGDWSRE 360
  361 SAEAQRMLRE LRGRDFKKHL QEAEAQKMEA QLLLNRIRTW LESHQVENNG LLKNIRDSLN 420
  421 DYEAKLQDLR SVLQEAAAQG KQATGLNHEN EGVLGAIQRQ MKEMDSLKKY LTEHLATADA 480
  481 SLLQTNSLLQ RMDTSQKEYE SLAAALNGAR QELNDQVREL SRSGGKAPLV AEAEKHAQSL 540
  541 QELAKQLEEI KRNTSGDESV RCVVDAATAY ESILNAIRAA EDAAGKADSA SESAFQTVIK 600
  601 EDLPRRAKTL SSDSEELLNE AKMTRKRLQQ EINPALNSLQ QTLKTVSVQK DLLDANVTAV 660
  661 RNDLRGIQRG DIDSVVSGAK SMVRKANGIT SEVLDGLSPI QTDLGRIKDS YGSTRHEDFN 720
  721 KALIDANNSV KKLTKKLPDL FVKIESINQQ LLPLGNISDN VDRIRELITQ ARDAANKVAI 780
  781 PMRFNGKSGV EVRLPNDLED LKGYTSLSLF LQRPDLRENG GTEDMFVMYL GNKDASKDYI 840
  841 GMAVVDGQLT CVYNLGDREA EVQIDQVLTE SESQEAVMDR VKFQRIYQFA KLNYTKEATS 900
  901 NKPKAPAVYD LEGGSSNTLL NLDPEDAVFY VGGYPPDFEL PSRLRFPPYK GCIELDDLNE 960
  961 NVLSLYNFKT TFNLNTTEVE PCRRRKEESD KNYFEGTGYA RIPTQPNAPF PNFIQTIQTT1020
 1021 VDRGLLFFAE NQDNFISLNI EDGNLMVRYK LNSEPPKEKG IRDTINDGKD HSILITIGKL1080
 1081 QKRMWINVNE RSVRIEGEIF DFSTYYLGGI PIAIRERFNI STPAFQGCMK NLKKTSGVVR1140
 1141 LNDTVGVTKK CSEDWKLVRT ASFSRGGQMS FTNLDVPSTD RFQLSFGFQT FQPSGTLLNH1200
 1201 QTRTSSLLVT LEDGHIELST RDSNIPIFKS PGTYMDGLLH HVSVISDTSG LRLLIDDQVL1260
 1261 RRNQRLPSFS NAQQSLRLGG GHFEGCISNV LVQRFSQSPE VLDLASKSTK KDASLGGCSL1320
 1321 NKPPFLMLFK SPKRFNKGRI FNVNQLMQDA PQATRSTEAW QDGRSCLPPL NTKASHRALQ1380
 1381 FGDSPTSHLL LKLPQELLKP RSQFSLDIQT TSPKGLVFYA GTKDSFLALY VADGRVVFAL1440
 1441 GAGGKKLRLR SKERYHDGKW HTVVFGLNGG KARLVVDGLR AQEGSLPGNS TISPREQVYL1500
 1501 GLPLSRKPKS LPQHSFVGCL RDFQLNSKPL DSPSARFGVS PCLGGSLEKG IYFSQGGGHV1560
 1561 ILANSVSLGP ELKLTFSIRP RSLTGVLIHV GSQSGQRLSV YMEAGKVTTS VSSDAGGSVT1620
 1621 SITPKQSLCD GQWHSVAVSI KQRILHLELD TDSSYTVAPL SFSPNSTRGS LHVGGVPDKL1680
 1681 KMLTLPVWNS FFGCLKNIQV NHVPVPITEA TEVQGSVSLN GCPDH

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