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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9945326, gi|1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.82
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPLFLVLSC LGQLIAVGKD IETPLIQITV PEKIETNIKD AKESETQVTY VIRIEGKAYT  60
   61 LQLEKQSFLH PHFVTNLHNK LGTLQPYFSL VKSHCFYQGH AVEIPASTVT LSTCSGLRGL 120
  121 LQLENVTYGI EPLESSTTLE HILYEIQNHK IDYSPLKENY TNSQDESGSY RILVKPLKSS 180
  181 NSKLRKRILT VKIIMDKGMF DHVGSEVGVA TQKVVQMFGL INTMFSQLKM TVMLNSLEIW 240
  241 SEENKIETNG DADEVLQRFL LWTHKEMPQT TKEITYLLLY KDHPDYVGAT YHGMACNPKF 300
  301 TAGIALHPKT LGVEGFAIVL SQLLGINLGL TYDDIYNCFC RGSTCIMNPS AIHSEGIKVF 360
  361 SSCSMDEFRQ LASQPDLDCL LKTQETEVVA LPQAAKVCGN YILEPPEQCD CGPAERCSHK 420
  421 KCCKSEDCTL LSDAECGSGA CCDKRTCKIA ERGRLCRKST DQCDFPEFCN GTSEFCVADI 480
  481 KAADLEPCNN ETAYCFKGVC QDRDRQCTDL FGKYAKGPNY VCAQEVNLQN DKFGNCHGRC 540
  541 NYSALFCGKA VCYWSFAELV KTDVFDVQYT YLGGQVCVSA HLRVRNDETK DDTYVRDGTI 600
  601 CGNGQVCYRG ECLRVHVLRG DRECEADDKC QGHGICNNQN NCQCEAGFAP PECDMTPSSP 660
  661 GGSMDDGFWL PLDKSTPLVI KRPGTQYKKG LLISFYVFLP FLIVTAIMVV KQNISKMFGQ 720
  721 GEEEFSEGSI SEEINDSKQS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle