YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P2Y12_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVPGANATS ANTTSIPGTS TLCSRDYKIT QVLFPLLYTV LFFAGLITNS LAMRIFFQIR  60
   61 SKSNFIIFLK NTVISDLLMI LTFPFKILSD AKLGAGHLRT LVCQVTSVTF YFTMYISISF 120
  121 LGLITIDRYL KTTRPFKTSS PSNLLGAKIL SVAIWAFMFL LSLPNMILTN RRPKDKDITK 180
  181 CSFLKSEFGL VWHEIVNYIC QVIFWINFLI VIVCYSLITK ELYRSYVRTR GSAKAPKKRV 240
  241 NIKVFIIIAV FFICFVPFHF ARIPYTLSQT RAVFDCNAEN TLFYVKESTL WLTSLNACLD 300
  301 PFIYFFLCKS FRNSLMSMLR CSTSGANKKK GQEGGDPSEE TPM

Type	Start	End	Confidence
Non-Cytoplasmic	1	35	0.88
Transmembrane Helix	36	57	0.88
Cytoplasmic	58	65	0.89
Transmembrane Helix	66	88	0.85
Non-Cytoplasmic	89	106	0.84
Transmembrane Helix	107	126	0.90
Cytoplasmic	127	143	0.86
Transmembrane Helix	144	163	0.92
Non-Cytoplasmic	164	197	0.94
Transmembrane Helix	198	219	0.94
Cytoplasmic	220	239	0.96
Transmembrane Helix	240	261	0.95
Non-Cytoplasmic	262	289	0.96
Transmembrane Helix	290	308	0.72
Cytoplasmic	309	343	0.72