YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12082729
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGARGAWDL LCVLLVLLRG QTGTSQPSAS PGEPSPPSIQ PAQSELIVEA GDTIRLTCTD  60
   61 PAFVKWTFEI LDVRIENKQS EWIRGKAEAI XTGKYTCSNS NGFRSSIYVF VRDPAKLFLV 120
  121 GLPLFGKEDS DAXFRCLLTD PQVSNYSFIE CDGKSLPTDL TFVPNPKAGI TIKNVRGAYH 180
  181 RFCVRCAAQR DGTWLHSDKF TLKVRAAIKA IPVVSVPETS HLLKKGDTFT VVCTIKDVST 240
  241 SVNSMWLKMN PQPQHIAQVK HNSWHRGDFN YERQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.97
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	274	0.99