YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9719420, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSADFEGYEQ DFAVLTAEIT SKISRVPRLP PDEKKQMVAN VEKQLEEARE LLEQMDLEVR  60
   61 EIPPQSRGMY SNRMRSYKQE MGKLETDFKR SRIAYSDEVR NELLGDAGNS SENQRAHLLD 120
  121 NTERLERSSR RLEAGYQIAV ETEQIGQEML ENLSHDRERI QRARERLRET DANLGKSSRI 180
  181 LTGMLRRIIQ NRILLVILGI IVVITILTAI TFFVRGH

Type	Start	End	Confidence
Cytoplasmic	1	192	0.93
Transmembrane Helix	193	214	0.94
Non-Cytoplasmic	215	217	0.84