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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: XYLT2_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVASARVQKL VRRYKLAIAT ALAILLLQGL VVWSFSGLEE DEPGEKGRQR KPRPLDPGEG  60
   61 SKDTDSSAGR RGSAGRRHGR WRGRAESPGV PVAKVVRAVT SRQRASRRVP PAPPPEAPGR 120
  121 QNLSGAAAGE ALIGAAGFPQ HGDTGSVEGA PQPTDNSFTP KCEIVGKDAL SALARASTKH 180
  181 CQQEIANVVC LHQAGNLMPK SVPRHCQLAG KVSPGIQWEE VRAQQPVSGP LVRIAYMLVV 240
  241 HGRAVRQLKR LLKAVYHEEH FFYIHVDKRS NYLYREVVEL AQHYDNVRVT PWRMVTIWGG 300
  301 ASLLRMYLRS MKDLLETPGW TWDFFINLSA TDYPTRTNEE LVAFLSKNRD KNFLKSHGRD 360
  361 NSRFIKKQGL DRLFHECDSH MWRLGERQIP AGIVVDGGSD WFVLTRSFVE YVVYTEDPLV 420
  421 AQLRQFYTYT LLPAESFFHT VLENSPACES LVDNNLRVTN WNRKLGCKCQ YKHIVDWCGC 480
  481 SPNDFKPQDF LRLQQVSRPT FFARKFESTV NQEVLEILDF HLYGSYPPGT PALKAYWENI 540
  541 YDMADGPSGL SDVLLTAYTA FARISLRHAA TVSPLATAVC RFEPRGLPSS VHLYFYDDHF 600
  601 QGYLVTQAVQ PSAQGPAETL EMWLMPQRLL KPLGHSDQAS RLQSLEVGTE WDPKERLFRN 660
  661 FGGLLGPLDE PVAMQRWARG PNLTATVVWI DPTYVVATSY DITVDADTEV TQYKPPLSLP 720
  721 LRPGAWTVRL LQFWEPLGET RFLVLPLTFN HKLPLRKDDA SWLHAGPPHN EYMEQSFQGL 780
  781 SGILNLPQPE AVEEAARRHT ELTGPALEAW TDGELSSFWS VAGLCAIGPS SCPSLELCRL 840
  841 TSWSSLSPDP KSELGPVKAD GRLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle