YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|124504347
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGHLYTVPI REQGNIYKPN NKAMADEVNE KQVYDAHTKE IDLVNRDPKH LNDDVVKIDF  60
   61 EDVIAEPEGT HSFDGIWKAS FTTFTVTKYW FYRLLSTIFG IPMALIWGIY FAILSFLHIW 120
  121 AVVPCIKSFL IEIQCISRVY SIYVHTFCDP LFEAIGKIFS NIRISTQKEI

Type	Start	End	Confidence
Cytoplasmic	1	89	0.89
Transmembrane Helix	90	122	0.73
Non-Cytoplasmic	123	170	0.60