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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34851887, gi|...
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.26
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAPPARALL LFPRRGPAVR AWAPAVSSRT WLASEWTPLV RAWTSLIHEP SPGLRFPVPL  60
   61 SGLPGGVGRW ATSSGIRRCW VLAGPRAAHP LFARLQGAAA TGVRDLGNDS QRRPATTGRS 120
  121 EVWKLLGLVR PERGRLSAAV GFLAVSSVIT MSAPFFLGKI IDVIYTNPTE DFGDSLTRLC 180
  181 AGLTCVFLCG AAANSIRVYL MQSSGQSIVN RLRTSLFSSI LRQEVAFFDK TRTGELINRL 240
  241 SSDTALLGHS VTENLSDGLR AVAQASVGVG MMFFVSPSLA TFVLSVVPPI SVLAVIYGRY 300
  301 LRKLSKATQD SLAEATQLAE ERIGNIRTIR AFGKEMTEVE KYTSRVDQLL QLARKEALAR 360
  361 AGFFGAAGLS GNLIVLSVLY KGGLLLGSTH MTVGELSSFL MYAFWVGLSI GGLSSFYSQL 420
  421 MKGLGAGGRL WELLERQPRL PFNEGIVLDE KTFQGALEFR NVHFTYPARP EVSVFQDFSL 480
  481 SIPSGSVTAL VGPSGSGKST VVSLLLRLYD PSSGTVSLDG HDIRQLNPVW LRSKIGTVSQ 540
  541 EPVLFSCSVA ENIAYGADNL SSVTARQVER AAEVANAAEF IRSFPQGFDT VVGEKGVLLS 600
  601 GGQKQRIAIA RALLKNPKIL LLDEATSALD AENEHLVQEA LDRLMEGRTV LIIAHRLSTI 660
  661 KNANFVAVLN QGKICEHGTH EELLLKPNGL YRKLMNKQSL LLHNGAEQFL EPAQA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle