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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53734276, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHHGASSGQ GHLRAGWEQR LERSLPAPKL GLLWMGLGLA LVLALFDSTV LWVPARAYPL  60
   61 PSQGHSVKFS AVAPQLQNAF GWRNLTCPAC KVLFTALNYG LKKEPNVARV GSVAIKMCKM 120
  121 LNIAPLNVCQ SAVHLFEDDV VDVWTRSVLS PSEACGLLLG SSCGHWDIFS TWNISLPSVP 180
  181 KPPPKPPSPP APGAPVSRVL FLTDLHWDHD YLEGTDPNCA DPLCCRRGSG WPPNSRTGAG 240
  241 YWGEYSKCDL PLRTLESLLK GLGPAGPFEM VYWTGDIPAH DVWQQSRQDQ LRALNTITDL 300
  301 VWKFLGPVPV YPAVGNHEST PVNGFPPPFI KGNQSSQWLY EAMAKAWEPW LPADALHTLR 360
  361 IGGFYALTPR PGLRLISLNM NFCSRENFWL LINSTDPAGQ LQWLVDELQA AENRGDKVHI 420
  421 IGHIPPGHCL KSWSWNYYKI IARYENTLAG QFFGHTHVDE FEIFYDEETL SRPLAVAFLG 480
  481 PSATTFINLN PGYRVYQIDG NYPGSSHVVL DHETYILNLT QANAPGGTPS WKRLYRARET 540
  541 YGLPDAMPAS WHNLVYRMRA DEQLFQTFWF LYHKGHPPSE PCGTPCRLAT LCAQLSARAD 600
  601 SPALCRHLMP NGSLPDAHSL WSRPLLC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle