YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157819491, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESMESNTQ QLDNPEDEEY LMSGSRYSII SSRLRTKFGI KSLAEYTKQS HNPLVLPLLS  60
   61 FLFLAGLLLI ILVLVSKVPS SEVQDKIYQE LMQLKTEVHD GLCQPCPRDW TFFNGSCYFF 120
  121 SKSQRNWHNS ITACKELGAQ LVIVETDEEQ TFLQQTSKTR GPTWMGLSDM HNEATWHWVD 180
  181 GSPLSPSFAQ YWNRGEPNNV GDEDCAEFSG DGWNDLRCDT RIFWICKKVS TSSCTIK

Type	Start	End	Confidence
Cytoplasmic	1	53	0.87
Transmembrane Helix	54	75	0.92
Non-Cytoplasmic	76	237	0.89