YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IFNB_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRWTLHIA FLLCFSTTAL SIDYKQLQFR QSTSIRTCQK LLRQLNGRLN LSYRTDFKIP  60
   61 MEVMHPSQME KSYTAFAIQV MLQNVFLVFR SNFSSTGWNE TIVESLLDEL HQQTELLEII 120
  121 LKEKQEERLT WVTSTTTLGL KSYYWRVQRY LKDKKYNSYA WMVVRAEVFR NFSIILRLNR 180
  181 NFQN

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	184	0.99