YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109463769, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVVRAVAAV RFLVVLSTMA LCSLPPLGVS ATLNSVLINS NAIKNLPPPL GGAGGQPGSA  60
   61 VSVAPGVLYE GGNKYQTLDN YQPYPCAEDE ECGTDEYCSS PSRGAAGVGG VQICLACRKR 120
  121 RKRCMRHAMC CPGNYCKNGI CMPSDHSHLP RGEIEEGIIE NLGNDHGAGD GYPRRTTLTS 180
  181 KIYHTKGQEG SVCLRSSDCA TGLCCARHFW SKICKPVLKE GQVCTKHRRK GSHGLEIFQR 240
  241 CYCGEGLACR IQKDHHQTSN SSRLHTCQRH

Type	Start	End	Confidence
Signal Peptide	1	31	0.98
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	270	0.99