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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|59808174, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSPAPAHMW NIVLVLLSLL AVLPITTTEK NGIDIYSLTV DSRVSSRFAH TVVTSRVVNR  60
   61 ADTVQEATFQ VELPRKAFIT NFSMIIDGVT YPGVVKEKAE AQKQYTAAVG RGESAGLVKT 120
  121 TGRKTEQFEV SVNVAPGSKT TFELIYQELL QRRLGMYELL LKVRPEQLVK HLQMDIYIFE 180
  181 PQGISTLETE STFMTQELAN ALTTSQNKTK AHIQFKPTLS QQRKSQNEQD TVLDGDFTVR 240
  241 YDVDRSSTGG TIQIENGYFV HHFAPEDLPT MAKNVLFVID KSGSMAGKKI QQTREALIKI 300
  301 LKDLSTQDQF NIIVFSGEAN QWEQLLVQAT EENLNRAVDY ASKIPAQGGT NINKAVLSAV 360
  361 ELLDKSNQAE LLPSKSVSLI ILLTDGEPTV GETNPKIIQK NTQEAINGRY SLFCLGFGFD 420
  421 VNYPFLEKLA LDNGGLARRI YEDSDSALQL QDFYQEVANP LLSSVTFEYP SNAVEDVTRY 480
  481 NFQHHFKGSE MVVAGKLRDQ GPDVLLAKVS GQMHLQNITF QTEASIAQQE KEFQGPKYIF 540
  541 HNFMERLWAL LTIQQQLEQR ISASGAELEA LEAQVLNLSL KYNFVTPLTH MVVTKPEDQE 600
  601 QFQVAEKPTE VDGGVWSILS AVQRHFKTPT TGSKLLTSRL RGNRFQTLSR LGDGLVGSRQ 660
  661 YMPPPGLPGP PGLPGPPGPP GHPHFASSID YGRQPSLGRV LDLPSLSSQD PAGPSLAMLP 720
  721 KVVEQEGTTP EESPNPDHPR APTIILPLPG SGVDQLCVDI LHSEKPMKLF VDINQGLEVV 780
  781 GKYEKNIGFS WIEVTILKPH LQVHATPERL VVTRGRKNSE YKWKKTLFSV LPGLKMTMDK 840
  841 TGLLQLSGPD KVTISLLSLD DPQRGLMLLL NDTHHFSNDI TGELGQFYQD IIWDDTKQTV 900
  901 RVLGIDYPAT RELKLSYQDG FPGTEISCWT VKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle