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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AT1B4_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRQLRSRRA PAFPYGYRYR LDDQDEMNHN YLADEEEEAE EEAQVMMVPG LEEEEEEEEG  60
   61 KEEEEEREEE EGQGQSTGNA WWRKLQIVNE YLWDPEKRMS LARTGQSRSL ILVIYFFFYA 120
  121 SLAAVITLFI YMLFLAISPY MPTFTEQVKP PGVMIRPFAH SLNFNFNVSE PETWQRYVIS 180
  181 LNGFLQGYND SLQEEMNIDC PPGQYFIQDG DEDEDKKACQ FKRSFLKNCS GLEDPTFGYS 240
  241 TGQPCILLKM NRIVGFRPEF GDPVKVSCKV QKGDENDIRS INYYPESASF DLRYYPYYGK 300
  301 LTHVNYTSPL VAMHFTDVVK NQEVPVQCQL KGKGIVNDVI NDRFVGRIIF TLNIET

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle