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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109503014, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGVTGLRVL LCLLTLQTMP ALGLATGRPR GNEKRQAVDT TVNGVSIRSL KVNCKVTSRF  60
   61 AHYVITSQVV NSANKAREVA FDVEIPKTAF ISDFAITADG NAFIGDIKDK VTAWKQYRKA 120
  121 AISGENAGLV RASGRNMEQF TIHITVGAQS KATFQLTYEE VLKRRLTQYD IVIKVRPKQL 180
  181 VHHFEIDVDI FEPQGISRLD AQASFLSKEL AAQTIKKSFS GKKGHVLFRP TVSQQQSCPT 240
  241 CSTSLLNGDF KVTYDVNRDK LCDLLVANNY FTHFFAPQNL TNMSKNLVFV IDISGSMEGQ 300
  301 KVKQTKEALL KILGDMKPVD NFDLVLFGSQ VQSWKGSLVP ASHANLQAAQ DFVRRFSLAG 360
  361 ATNLNGGLLR GIEILNRAQG SHPELSSPAS ILIMLTDGEP TEGETDRSQI LKNVRNAIRG 420
  421 RFPLYNLGFG HDLDFSFLEV MSIENNGWAQ RIYEDHDATQ QLQGFYNQVA HPLLTDVELQ 480
  481 YPQDAVLALT QHRHKQYYDG SEIVVAGRIA DHKLSTFKAD VRAHGEKQEF KATCLVDEEE 540
  541 MKKLLRERGH MLENHVERLW AYLTIQELLA KRMKTEGEER ANLSSQILKM SLDYHFVTPL 600
  601 TSMTIRGLTD EDGLEPIIDK PPEDSQPLEM VGPRRTFVLS AAQPSPTAHP IGSKLPTRVT 660
  661 GVDTDPHFII YVPTKEDSLC FNINEEPGVI LNLVQDPDTG FSVNGQLIGI KAGSPGQHES 720
  721 TYFGRLGVSS PTSDFQLEVT PQNITLNPSS GGPVFSWRDQ AVLQKDGVVV TINKKRNLVV 780
  781 SVDDGATFEI VLHRTWRGSS IHQDFLGFYV LDSFRMSART QGLLGQFFSP LDFEVFDLRP 840
  841 GSDPTKTDAT MVVKNRQLTV TRGLQKDYSK DPRHGTEVSC WFVHDNGAGL IDGVHTDYIV 900
  901 SDIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle