YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|131889872, gi...
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLKATKTWF LRLLPVVLFF ICYYCSQFYF ESSGGKSPHP TLALCPNYRL QKKWENLNLN  60
   61 MSRKPELFLK LEDFFWKDHL SAEALPYGIK GSELLLLKVL AAISSFTMPA NIESLDCRTC 120
  121 AVIGNGFALK NSSLGEIINK YDVVIRLNDA PVRGFEEDVG NKTTLRLFYP ESASYNPGIH 180
  181 NDPDTLLVLV PFKQQDLRWL KEILYDEKRV QKGFWKPPPQ IWLGRASQIR VLDPYFLRIT 240
  241 ARKFLQIPVQ PRKQQKAVHP TTGLLAVFVA LNYCDVVHVA GFGYPASRNQ NQPIHYYGQQ 300
  301 TMKSMKNSYH DLNQEAQILH RLEEQGVILY LHPHS

Type	Start	End	Confidence
Cytoplasmic	1	8	0.66
Transmembrane Helix	9	30	0.65
Non-Cytoplasmic	31	335	0.97