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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|139948691, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERPRWSPMW KTKRWLLDST VFKLITVSLV LVLQAPHVRA EPVDVLKVLE FPTVPEGVEK  60
   61 TSGFCTNRRA SQPDAAYKIS KNAQLSAPTK QLFPDGVFPE DFSILTTIKP KAGIQSFLLS 120
  121 IYNEKGVQQL GVEVGRSPVF LYEDQEGKPA PEDYPLFRAL NLADGKWHRV GISVEKKTVT 180
  181 IVVDCKKKLT KPLGRSDHAS IDTKGITVFG TRILDEESFE GDIQQLLIVA DPKAAYDYCE 240
  241 HYSPDCDVPH KDTLQAQEPG EEYTTPVEYG DLYDYYEGGT PTATDEFSEP QRVKRSVSMK 300
  301 SKRTKKSPKS FAKPYKYLEP KQAKKLVPKK KRYGYLPPTP RQAILGLGGG AALGQKGEKG 360
  361 EPAVIEPGML IEGPSGPPGP AGLPGPPGLQ GPPGLAGDPG DRGPPGRAGL PGADGLPGPP 420
  421 GTMLMLPFRF GGDGEKGPVV SAQEAQAQAI LSQARLAMRG PPGPMGLTGR SGPVGLPGPP 480
  481 GLKGESGDHG PQGPRGIQGP PGQIGKPGKR GRAGADGARG MPGESGSKGD RGFDGLPGLP 540
  541 GEKGHRGETG PAGPPGPTGE DGPRGEDGEI GPRGLAGESG PRGLLGPRGP PGPPGQPGIA 600
  601 GVDGPQGPKG NMGPQGEPGP PGQQGIPGGQ GLPGPQGPIG PPGEKGPQGR SGLPGLPGAD 660
  661 GPPGHPGKEG PPGEKGALGQ PGPQGPIGYP GPRGVKGADG VRGLKGGKGE KGEDGFPGFK 720
  721 GDMGLKGDRG ELGLAGPRGE DGPEGPKGRA GPNGESGPQG SAGEKGKLGV PGLPGYPGRQ 780
  781 GPKGSTGFPG FPGANGEKGG RGVAGKAGPR GQRGPTGPRG ARGARGPTGK PGPKGTAGND 840
  841 GPPGPPGERG PQGPQGPVGF PGPKGPPGPP GKDGLPGHPG QRGETGFQGK TGPPGPGGVV 900
  901 GPQGPTGETG PIGERGHPGP PGPPGEQGLP GAGGKEGAKG DPGPQGSPGK DGPPGLRGFP 960
  961 GERGLPGVTG PPGLKGAEGP QGPPGPVGSP GERGAAGSAG PIGLPGRTGP QGPPGPAGEK1020
 1021 GAPGERGPLG PAGRDGVQGP VGLPGPAGPQ GPPGEDGDKG EVGEPGQKGS KADKGEQGPP1080
 1081 GPPGLQGPIG APGPAGADGE PGPRGQQGMF GQKGDEGSRG FPGPPGPIGL QGLPGPPGEK1140
 1141 GENGDVGPMG PPGPPGPRGP QGPPGADGPQ GPPGGIGGMG AVGEKGEQGE AGNPGPPGEP1200
 1201 GPGGPKGERG EKGEAGPPGA AGPAGPKGPP GDDGPKGNPG PVGFPGDPGP PGEPGVAGID1260
 1261 GGPGEKGEDG ESGQPGPPGP SGEAGPPGPP GKRGPPGAHG AEGRQGEKGA KGEAGLEGPP1320
 1321 GKTGPVGPQG PSGKPGPEGL RGIPGPVGEQ GLPGAPGQDG PPGPMGPPGL PGLKGDPGSK1380
 1381 GEKGHPGLIG LIGPPGEQGE KGDRGLPGPQ GAAGSKGDNG ISGASGPIGP PGPPGLPGPQ1440
 1441 GPKGSKGSTG PAGQKGDTGT VGPPGPPGPP GEVIQPLPIH SPKKSRRSID MQADEAGTML1500
 1501 DYGEGMEDIF SSLNNLKQDI ERMKYPMGTQ NNPARSCKDL QLAHPEFPDG EYYIDPNQGC1560
 1561 SGDSFKVYCN FTAGGETCIF PDKKSNGVRI SSWPKEVPGS WFSEFKRGKI LSYVDAEGNS1620
 1621 INMVQMTFLK LLTASARQNL TYSCHQSVAW HDATTDSYDR ALHFLGSNDE EISYDNNPYI1680
 1681 KALSDGCAVR KGYGKTVLEI NTPKIDQVPI VDVKFTDFGD PNQKFGFEVG PVCFLG

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