YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RSLBA_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPLTMSGHF LLAPIPESSS DYLLPKDIKL AVLGASCVGK SAMIVRFLTK RFIGDYEPNT  60
   61 GKLYSRLVYV EGDQLSLQIQ DTPGGIQAQD SLGQMVDSLS KCVQWAEGFL LVYSITDYES 120
  121 YQSIRPLYQH IRKVHPDGKA PVVIVGNKGD LLHARQVQTH EGLQLANELG SLFLEISTSE 180
  181 NYEDVCDVFQ HLCKEVSKLH SLSGERRRAS IIPRPRSPNM QDLKRRFRQA LSSKAKAAST 240
  241 LG

Type	Start	End	Confidence
Signal Peptide	1	20	0.81
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	242	0.99