YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DPM2_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGTDQAVG FGLVAVSLII FTYYTTWVIL LPFIDSQHVI HKYFLPRAYA VLLPLAAGLL  60
   61 LLLFVGLFIT YVLLKSQKVT KKAQ

Type	Start	End	Confidence
Cytoplasmic	1	8	0.88
Transmembrane Helix	9	31	0.91
Non-Cytoplasmic	32	49	0.88
Transmembrane Helix	50	74	0.90
Cytoplasmic	75	84	0.94